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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LGG rs7772088 chr6:36040474 A/G 1.02E-9 405 15.67 15.13 6.15 KM Plot
LGG rs77728865 chr7:64932453 C/T 1.15E-7 391 15.32 15.2 2.27 KM Plot
LGG rs7775290 chr6:36036909 T/C 1.02E-9 405 15.67 15.13 6.15 KM Plot
LGG rs77808611 chr2:17891483 A/G 1.44E-8 406 15.3 15.67 7.33 KM Plot
LGG rs77829175 chr21:43233343 G/A 4.96E-6 397 15.37 15.97 8 KM Plot
LGG rs7787837 chr7:92845242 A/G 0.00016 400 15.17 16.28 8.97 KM Plot
LGG rs77896070 chr7:56047524 G/T 1.58E-10 406 15.32 15.93 7.8 KM Plot
LGG rs77918542 chr2:17986029 A/G 2.37E-8 406 15.17 16.22 7.33 KM Plot
LGG rs77953392 chr9:95442289 C/T 0.00016 406 15.17 17.7 7.12 KM Plot
LGG rs77985364 chr4:84613538 G/C 8.88E-16 400 15.37 11.83 5.17 KM Plot
LGG rs7798756 chr7:16496092 G/A 1.82E-5 402 15.37 16.27 9.3 KM Plot
LGG rs78002643 chr14:74377703 T/A 0 405 14.93 17.03 1.23 KM Plot
LGG rs78022337 chr16:77762832 C/A 1.12E-5 406 15.72 13.57 8.03 KM Plot
LGG rs78023969 chr7:150734364 G/T 0.000157 406 15.32 14.37 8.97 KM Plot
LGG rs78037245 chr20:3350700 C/T 1.04E-7 406 15.93 11.55 6.83 KM Plot